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Book Chapters and Review Articles

 

  1. Das BB, Anna de Angelis, and Opella SJ, Solid State NMR of membrane proteins in phospholipid bilayers. (2015) Encyclopedia of spectroscopy and spectrometry. (Invited book chapter)

  2. Das BB and Ramanathan KV, Reconstruction of Two-dimensional spectra from one- dimensional projections-Examples from solid state NMR. (2014) J. IISc., 94:4. (Invited review article)

  3. Das BB and Opella SJ. Demonstration of the Equivalence of Solid-state NMR Orientational Constraints from Magnetic and Rotational Alignment of the Coat Protein in a Filamentous Bacteriophage. (2013) Advances in Biological Solid-State NMR: Proteins and membrane activated peptides, Chapter 4, Edited by Frances Separovic and Akira Naito, Published by Royal Society of Chemistry. (Invited book chapter)

  4. Das BB and Opella SJ. Structure Determination of Membrane Proteins in Phospholipid Bilayers by Solid-State NMR. (2013) Encyclopedia of Biophysics, Springer-Verlag (G. C. K. Robberts, Editor) 1463-1470. (Invited book chapter)

  5. Marassi FM, Das BB, Lu GJ, Nothnagel HJ, Park SH, Son WS, Tian Y, Opella SJ. Structure determination of membrane proteins in five easy pieces. (2011) Methods, 55(4), 363-9. (Review article)

  6. Wu CH, Das BB and Opella SJ. Manifestations of the anisotropic 13C chemical shift of methyl groups in solid state NMR spectra of peptides and proteins. (2010) Future Directions of NMR, Edited by C. L. Khetrapal, A. Kumar and K. V. Ramanathan, 15, 179-185. (Invited book chapter)

 

Peer Reviewed Publications

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  1. Das BB and Opella SJ, Simultaneous Cross Polarization to 13C and 15N with 1H Detection at 60 kHz MAS Solid-state NMR, J. Magn. Reson. (2016) 262, 20-26. 

  2. Doty David F, Das BB,  Doty Elis PD, Microwaves in Dynamic Nuclear Polarization NMR. (submitted)

  3. Das BB, Park SH and Opella SJ, Membrane Protein Structure from Rotational Diffusion, Biochimica et Biophysica Acta, (2015) 1848, 229-245.

  4. Zhang H, Lin EC, Das BB, Tian Y, and Opella SJ, Structural determination of Virus protein U from HIV-1 by NMR in membrane environments, Biochimica et Biophysica Acta, (2015) 1848, 3007-3018.

  5. Das BB and Opella SJ, Structure of Y21M fd determined by rotationally aligned solid state NMR. (2015) in review.

  6. Das BB and Ramanathan KV, Reconstruction of Two-dimensional spectra from one-dimensional projections-Examples from solid state NMR. J. IISc., (2014) 94:4.

  7. Das BB and Opella SJ, Multiple acquisitions/multiple observation separated local field/chemical shift correlation solid state magic angle spinning NMR spectroscopy, J. Magn. Reson. (2014) 245, 98-104.

  8. Das BB, Zhang H and Opella SJ, Dipolar Assisted Assignment Protocol for Rotationally Aligned Membrane Proteins in Phospholipid Bilayer, J. Magn. Reson. 242, 224-232.

  9. Lobo NP, Das BB, Narasimhaswamy T and Ramanathan KV, Molecular topology of three ring nematogens from 13C-1H dipolar couplings, RSC Adv. (2014) 4, 33383-33390.

  10. Reddy MK, Varathan E, Lobo NP, Das BB, Narasimhaswamy T and Ramanathan KV, High- resolution solid state 13C NMR studies of bent-core mesogens of benzene and thiophene. J. Phys. Chem. C, (2014) 118, 15044-15053.

  11. Das BB, Lin EC, Opella SJ, Experiments Optimized for Magic Angle Spinning and Oriented Sample Solid-State NMR of Proteins. J Phys Chem B. (2013) 117(41), 12422-31.

  12. Reddy MK, Reddy KS, Narasimhaswamy T, Das BB, Lobo NP and Ramanathan KV. 13C–1H dipolar couplings for probing rod-like hydrogen bonded mesogens, New J. Chem. (2013) 37, 3195- 3206.

  13. Park SH, Das BB, Casagrande F, Tian Y, Nothnagel HJ, Chu M, Kiefer H, Maier K, De Angelis A, Marassi FM and Opella SJ, Structure of the Chemokine Receptor CXCR1 in Phospholipid Bilayers, Nature, (2012) 491, 779–783.

19.  Das BB, Nothnagel HJ, Lu GJ, Son WS, Tian Y, Marassi FM, Opella SJ. Structure determination of a membrane                protein in proteoliposomes. J Am Chem Soc., (2012) 134(4), 2047-56.

20.  Wu CH, Das BB and Opella SJ. Manifestations of the anisotropic 13C chemical shift of methyl groups in solid state            NMR spectra of peptides and proteins. Future Directions of NMR, Springer, (2011) 15, 179-185.

21.  Marassi FM, Das BB, Lu GJ, Nothnagel HJ, Park SH, Son WS, Tian Y, Opella SJ. Structure determination of                      membrane proteins in five easy pieces. Methods, (2011) 55(4), 363-9.

22.  Park SH, Casagrande F, Das BB, Albrecht L, Chu M, Opella SJ. Local and global dynamics of the G protein-coupled          receptor CXCR1. Biochemistry, (2011) 50(12), 2371-80.

23.  Kalaivani S, Narasimhaswamy T, Das BB, Lobo NP, Ramanathan KV. Phase characterization and study of molecular        order of a three-ring mesogen by 13C NMR in smectic C and nematic phases. J Phys Chem B. (2011) 115(40),                    11554-65.

24.  Park SH, Das BB, De Angelis AA, Scrima M, Opella SJ. Mechanically, magnetically, and "rotationally aligned"                  membrane proteins in phospholipid bilayers give equivalent angular constraints for NMR structure determination.

       J Phys Chem B., (2010) 114(44), 13995-4003.

25.  Wu CH, Das BB, Opella SJ. (1)H-(13)C Hetero-nuclear dipole-dipole couplings of methyl groups in stationary and             magic angle spinning solid-state NMR experiments of peptides and proteins. J Magn Reson., (2010) 202(2), 127-134.

26.  Das BB, Sinha N, Ramanathan KV, The utility of phase alternated pulses for the measurement of dipolar couplings in        2D-SLF experiments. J Magn Reson, (2008) 194(2):237-44.

27.  Das BB, Ajithkumar TG, Ramanathan KV. Improved Pulse Schemes for SLF Spectroscopy for Static and Spinning            Samples, Solid State Nuclear Magnetic Resonance, (2008) 33, 57-63.

28.  Das BB, Ajithkumar TG, Sinha N, Opella SJ and Ramanathan KV. Cross- and axial-peak intensities in 2D-SLF                  experiments based on cross-polarization--the role of the initial density matrix. J Magn Reson., (2007) 185(2), 308-17.

29.  Das BB, Mitra A, Ramanathan KV. Reconstruction of a solid-state high-resolution heteronuclear J-resolved 2D-                  spectrum from 1D experiments. Chem. Phys. Letts., (2007) 442, 474-477.

30.  Das BB, Ajithkumar TG, Ramanathan KV. Enhancing Cross-Peak Intensity in 2D-SLF Spectroscopy- The Role of              Equilibrium carbon magnetization in Cross-Polarization Experiments. Chem. Phys. Letts., (2006) 426, 422-425.

31. Thomas B, Das BB and Sugunan S., Rare earth exchanged (Ce3+, La3+ and RE3+) h-Y zeolites as solid acid catalysts        for the synthesis of linear alkyl benzenes. Microporous and Mesoporous Materials, (2006) 95, 329-338.

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Conference Presentations

2017

1. Low-E Inverse Detected MAS Probe and Gradient Spectroscopy in Solid State NMR. Experimental Nuclear Magnetic Resonance Conference, CA, USA.

2016

  1. Solid state NMR structure determination of membrane proteins in phospholipid bilayers: New developments and applications,

2. Broad-Band Magic Sandwich Pulse Scheme For Simultaneous Homonuclear Dipolar Decoupling And Spin Exchange In Solids,

3. Reconstruction of Two-Dimensional Spectra from One-Dimensional Projections—Examples from Solid State NMR,      

     SMASH, 2016, San Diego, USA. 

2015      Multiple acquisitions and correlation spectroscopy for membrane protein structure determination,

  • NIH P41 executive committee meeting, University of California, San Diego, USA.

  • Experimental Nuclear Magnetic Resonance Conference, Asilomar, CA, USA.

2014    Membrane protein structure from rotational alignment in phospholipid bilayers,

  • National Center for Biological Sciences, Bangalore, India.

  • Indian Institute of Science, Bangalore, India.

2013    Experiments Optimized for rotationally aligned membrane proteins by MAS solid state NMR.

  • NIH P41 executive committee meeting, UC San Diego, USA.

  • Experimental Nuclear Magnetic Resonance Conference, CA, USA.

2012    Structure of membrane proteins in magnetically and rotationally aligned lipid bilayers by solid state NMR,

  • National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL, USA.

  • Experimental Nuclear Magnetic Resonance Conference, Miami, FL, USA

  • Nuclear Magnetic Resonance Society of India meeting, Bangalore,

2011    Structure and dynamics studies of membrane proteins in phospholipid bilayers by SS-NMR.

  • NIH P41 executive committee meeting, UC San Diego, USA.

  • Experimental Nuclear Magnetic Resonance Conference, CA, USA

2010    Magic angle spinning solid state NMR spectroscopy and applications to membrane proteins.

  • NIH P41 executive committee meeting, UC San Diego, USA.

2009    Probing Rotational Diffusion in Proteins With 13C Detection in Solid-State NMR With Methyl Alanine Labeled Peptides and Proteins.

  • 51’st Rocky Mountain Conference on Analytical Chemistry, CO, USA.

2008    Projection Reconstruction of Two-dimensional Spectrum from One-dimensional Experiments.

  • Nuclear Magnetic Resonance Society meeting, New Delhi, India.

2007    Reconstruction of a Solid-State High-Resolution Heteronuclear J-Resolved 2D Spectrum from 1D Experiments.

  • European Conference on Magnetic Resonance (EUROMAR)

2005    Dipolar Oscillation Under Phase Alternated Pulses.                                                                                                     India-France international conference on Nuclear Magnetic Resonance, National Chemical Laboratory, Pune, India

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PUBLICATIONS

University of California, San Diego

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